Hidemasa U. Bono: search on Z-Library

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1

How to Make Full Use of Database for Next-Gen Sequences

NAKAZATO, Takeru, BONO, Hidemasa

Year:

2016

File:

PDF, 697 KB

2016

2

Identification of functional enolase genes of the silkworm Bombyx mori from public databases with a combination of dry and wet bench processes

Kikuchi, Akira, Nakazato, Takeru, Ito, Katsuhiko, Nojima, Yosui, Yokoyama, Takeshi, Iwabuchi, Kikuo, Bono, Hidemasa, Toyoda, Atsushi, Fujiyama, Asao, Sato, Ryoichi, Tabunoki, Hiroko

Journal:

Year:

2017

Language:

english

File:

PDF, 2.34 MB

english, 2017

3

Calculating quality of public high-throughput sequencing data to obtain suitable subset for reanalysis from the Sequence Read Archive

Ohta, Tazro, Nakazato, Takeru, Bono, Hidemasa

Journal:

Year:

2017

Language:

english

File:

PDF, 560 KB

english, 2017

4

Comparative analysis of seven types of superoxide dismutases for their ability to respond to oxidative stress in Bombyx mori

Kobayashi, Yuta, Nojima, Yosui, Sakamoto, Takuma, Iwabuchi, Kikuo, Nakazato, Takeru, Bono, Hidemasa, Toyoda, Atsushi, Fujiyama, Asao, Kanost, Michael R., Tabunoki, Hiroko

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 3.36 MB

english, 2019

5

Identification of unique transcripts from a mouse full-length, subtracted inner ear cDNA library

Kirk W. Beisel, Toshiyuki Shiraki, Ken A. Morris, Celine Pompeia, Bechara Kachar, Takahiro Arakawa, Hidemasa Bono, Jun Kawai, Yoshihide Hayashizaki, Piero Carninci

Journal:

Year:

2004

Language:

english

File:

PDF, 243 KB

english, 2004

6

Identification of novel PPARγ target genes by integrated analysis of ChIP-on-chip and microarray expression data during adipocyte differentiation

Yutaka Nakachi, Ken Yagi, Itoshi Nikaido, Hidemasa Bono, Mio Tonouchi, Christian Schönbach, Yasushi Okazaki

Journal:

Biochemical and Biophysical Research Communications

Year:

2008

Language:

english

File:

PDF, 269 KB

english, 2008

7

Construction of a simple evaluation system for the intestinal absorption of an orally administered medicine using Bombyx mori larvae

Ichino, Fumika, Bono, Hidemasa, Nakazato, Takeru, Toyoda, Atsushi, Fujiyama, Asao, Iwabuchi, Kikuo, Sato, Ryoichi, Tabunoki, Hiroko

Journal:

Drug Discoveries & Therapeutics

Year:

2018

Language:

english

File:

PDF, 771 KB

english, 2018

8

Meta-Analysis of Hypoxic Transcriptomes from Public Databases

Bono, Hidemasa, Hirota, Kiichi

Journal:

Year:

2020

File:

PDF, 2.78 MB

2020

9

HIF-1-mediated suppression of mitochondria electron transport chain function confers resistance to lidocaine-induced cell death

Okamoto, Akihisa, Sumi, Chisato, Tanaka, Hiromasa, Kusunoki, Munenori, Iwai, Teppei, Nishi, Kenichiro, Matsuo, Yoshiyuki, Harada, Hiroshi, Takenaga, Keizo, Bono, Hidemasa, Hirota, Kiichi

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 2.15 MB

english, 2017

10

The study of metabolic pathways in tumors based on the transcriptome

Hidemasa Bono, Yasushi Okazaki

Journal:

Seminars in Cancer Biology

Year:

2005

Language:

english

File:

PDF, 1.17 MB

english, 2005

11

SayaMatcher: Genome scale organization and systematic analysis of nuclear receptor response elements

Hidemasa U. Bono

Journal:

Year:

2005

Language:

english

File:

PDF, 287 KB

english, 2005

12

Identification of novel steroid target genes through the combination of bioinformatics and functional analysis of hormone response elements

Kuniko Horie-Inoue, Kenichi Takayama, Hidemasa U. Bono, Yasuyoshi Ouchi, Yasushi Okazaki, Satoshi Inoue

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 189 KB

english, 2006

13

Suppression of mitochondrial oxygen metabolism mediated by the transcription factor HIF-1 alleviates propofol-induced cell toxicity

Sumi, Chisato, Okamoto, Akihisa, Tanaka, Hiromasa, Kusunoki, Munenori, Shoji, Tomohiro, Uba, Takeo, Adachi, Takehiko, Iwai, Teppei, Nishi, Kenichiro, Harada, Hiroshi, Bono, Hidemasa, Matsuo, Yoshiyuki

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 2.72 MB

english, 2018

14

Detection of genes with tissue-specific expression patterns using Akaike’s information criterion procedure

Kadota, Koji, Nishimura, Shin-Ichiro, Bono, Hidemasa, Nakamura, Shugo, Hayashizaki, Yoshihide, Okazaki, Yasushi, Takahashi, Katsutoshi

Journal:

Physiological Genomics

Year:

2003

Language:

english

File:

PDF, 879 KB

english, 2003

15

Construction of TUATinsecta database that integrated plant and insect database for screening phytophagous insect metabolic products with medicinal potential

Nakane, Wakana, Nakamura, Hisashi, Nakazato, Takeru, Kaminaga, Natsuki, Nakano, Miho, Sakamoto, Takuma, Nishiko, Maaya, Bono, Hidemasa, Ogiwara, Isao, Kitano, Yoshikazu, Iwabuchi, Kikuo, Kinoshita, Ka

Journal:

Scientific Reports

Year:

2020

File:

PDF, 2.12 MB

2020

16

Cluster analysis of genome-wide expression profiles to predict gene functions with KEGG

Bono, Hidemasa, Nakao, Mitsuteru, Kanehisa, Minoru

Journal:

Nature Genetics

Year:

1999

Language:

english

File:

PDF, 129 KB

english, 1999

17

All of gene expression (AOE): An integrated index for public gene expression databases

Bono, Hidemasa, Hoehndorf, Robert

Journal:

Year:

2020

Language:

english

File:

PDF, 1.87 MB

english, 2020

18

Can the silkworm (Bombyx mori) be used as a human disease model?

Tabunoki, Hiroko, Bono, Hidemasa, Ito, Katsuhiko, Yokoyama, Takeshi

Journal:

Drug Discoveries & Therapeutics

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

19

Functional transcriptomes: comparative analysis of biological pathways and processes in eukaryotes to infer genetic networks among transcripts

Hidemasa Bono, Yasushi Okazaki

Journal:

Current Opinion in Structural Biology

Year:

2002

Language:

english

File:

PDF, 117 KB

english, 2002

20

Superoxide dismutase down-regulation and the oxidative stress is required to initiate pupation in Bombyx mori

Nojima, Yosui, Bono, Hidemasa, Yokoyama, Takeshi, Iwabuchi, Kikuo, Sato, Ryoichi, Arai, Katsuhiko, Tabunoki, Hiroko

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 4.04 MB

english, 2019

21

Identification and functional analysis of consensus androgen response elements in human prostate cancer cells

Kuniko Horie-Inoue, Hidemasa Bono, Yasushi Okazaki, Satoshi Inoue

Journal:

Biochemical and Biophysical Research Communications

Year:

2004

Language:

english

File:

PDF, 381 KB

english, 2004

22

Comparative analysis of seven types of superoxide dismutases for their ability to respond to oxidative stress in Bombyx mori

Kobayashi, Yuta, Nojima, Yosui, Sakamoto, Takuma, Iwabuchi, Kikuo, Nakazato, Takeru, Bono, Hidemasa, Toyoda, Atsushi, Fujiyama, Asao, Kanost, Michael R., Tabunoki, Hiroko

Journal:

Scientific Reports

Year:

2019

File:

PDF, 3.36 MB

2019

23

Id4, a New Candidate Gene for Senile Osteoporosis, Acts as a Molecular Switch Promoting Osteoblast Differentiation

Tokuzawa, Yoshimi, Yagi, Ken, Yamashita, Yzumi, Nakachi, Yutaka, Nikaido, Itoshi, Bono, Hidemasa, Ninomiya, Yuichi, Kanesaki-Yatsuka, Yukiko, Akita, Masumi, Motegi, Hiromi, Wakana, Shigeharu, Noda, Te

Journal:

Year:

2010

Language:

english

File:

PDF, 4.62 MB

english, 2010

24

Superoxide Dismutases, SOD1 and SOD2, Play a Distinct Role in the Fat Body during Pupation in Silkworm Bombyx mori

Nojima, Yosui, Ito, Katsuhiko, Ono, Hiromasa, Nakazato, Takeru, Bono, Hidemasa, Yokoyama, Takeshi, Sato, Ryoichi, Suetsugu, Yoshitaka, Nakamura, Yuki, Yamamoto, Kimiko, Satoh, Jun-ichi, Tabunoki, Hiro

Journal:

Year:

2015

Language:

english

File:

PDF, 6.51 MB

english, 2015

25

Characterization of brown adipose tissue thermogenesis in the naked mole-rat (Heterocephalus glaber), a heterothermic mammal

Oiwa, Yuki, Oka, Kaori, Yasui, Hironobu, Higashikawa, Kei, Bono, Hidemasa, Kawamura, Yoshimi, Miyawaki, Shingo, Watarai, Akiyuki, Kikusui, Takefumi, Shimizu, Atsushi, Okano, Hideyuki, Kuge, Yuji, Kimu

Journal:

Scientific Reports

Year:

2020

File:

PDF, 1.76 MB

2020

26

Tumour resistance in induced pluripotent stem cells derived from naked mole-rats

Miyawaki, Shingo, Kawamura, Yoshimi, Oiwa, Yuki, Shimizu, Atsushi, Hachiya, Tsuyoshi, Bono, Hidemasa, Koya, Ikuko, Okada, Yohei, Kimura, Tokuhiro, Tsuchiya, Yoshihiro, Suzuki, Sadafumi, Onishi, Nobuyu

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 2.57 MB

english, 2016

27

RefEx, a reference gene expression dataset as a web tool for the functional analysis of genes

Ono, Hiromasa, Ogasawara, Osamu, Okubo, Kosaku, Bono, Hidemasa

Journal:

Scientific Data

Year:

2017

Language:

english

File:

PDF, 2.07 MB

english, 2017

28

GLIS1, a novel hypoxia-inducible transcription factor, promotes breast cancer cell motility via activation of WNT5A

Shimamoto, Kazumi, Tanimoto, Keiji, Fukazawa, Takahiro, Nakamura, Hideaki, Kanai, Akinori, Bono, Hidemasa, Ono, Hiromasa, Eguchi, Hidetaka, Hirohashi, Nobuyuki

Journal:

Year:

2020

File:

PDF, 1.71 MB

2020

29

Gene expression profiling in multipotent DFAT cells derived from mature adipocytes

Hiromasa Ono, Yoshinao Oki, Hidemasa Bono, Koichiro Kano

Journal:

Biochemical and Biophysical Research Communications

Year:

2011

Language:

english

File:

PDF, 901 KB

english, 2011

30

Differentiated embryo chondrocyte plays a crucial role in DNA damage response via transcriptional regulation under hypoxic conditions

Nakamura, Hideaki, Bono, Hidemasa, Hiyama, Keiko, Kawamoto, Takeshi, Kato, Yukio, Nakanishi, Takeshi, Nishiyama, Masahiko, Hiyama, Eiso, Hirohashi, Nobuyuki, Sueoka, Eisaburo, Poellinger, Lorenz, Tani

Journal:

Year:

2018

Language:

english

File:

PDF, 5.40 MB

english, 2018

31

Preprocessing implementation for microarray (PRIM): an efficient method for processing cDNA microarray data

KADOTA, KOJI, MIKI, RIKA, BONO, HIDEMASA, SHIMIZU, KENTARO, OKAZAKI, YASUSHI, HAYASHIZAKI, YOSHIHIDE

Journal:

Physiological Genomics

Year:

2001

Language:

english

File:

PDF, 656 KB

english, 2001

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